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Recruitment of a Lineage-Specific Virulence Regulatory Pathway Promotes Intracellular Infection by a Plant Pathogen Experimentally Evolved into a Legume Symbiont

Delphine Capela , Marta Marchetti , Camille Clerissi , Anthony Perrier , Dorian Guetta , et al.
Molecular Biology and Evolution, 2017, 34 (10), pp.2503-2521. ⟨10.1093/molbev/msx165⟩
Journal articles hal-02620519v1
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Transient Hypermutagenesis Accelerates the Evolution of Legume Endosymbionts following Horizontal Gene Transfer

Philippe Remigi , Delphine Capela , Camille Clerissi , Léna Tasse , Rachel Torchet , et al.
PLoS Biology, 2014, 12 (9), ⟨10.1371/journal.pbio.1001942⟩
Journal articles pasteur-01374959v1

Experimental evolution of rhizobia may lead to either extra- or intracellular symbiotic adaptation depending on the selection regime

Marta Marchetti , Camille Clerissi , Yasmine Yousfi , Carine Gris , Olivier Bouchez , et al.
Molecular Ecology, 2017, 26 (7), pp.1818-1831. ⟨10.1111/mec.13895⟩
Journal articles hal-01607703v1
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Bacillus subtilis, the model Gram-positive bacterium: 20years of annotation refinement

Rainer Borriss , Antoine Danchin , Colin R. Harwood , Claudine Médigue , Eduardo P. C. Rocha , et al.
Microbial Biotechnology, 2018, 11 (1), pp.3-17. ⟨10.1111/1751-7915.13043⟩
Journal articles cea-02291345v1

PanGBank: depicting microbial species diversity via PPanGGOLiN

Guillaume Gautreau , Adelme Bazin , Rémi Planel , Mathieu Gachet , Mathieu Dubois , et al.
JOBIM 2019 Journées Ouvertes Biologie, Informatique et Mathématiques, Jul 2019, Nantes, France
Conference poster hal-04358380v1
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PPanGGOLiN: Depicting microbial diversity via a partitioned pangenome graph

Guillaume Gautreau , Adelme Bazin , Mathieu Gachet , Rémi Planel , Laura Burlot , et al.
PLoS Computational Biology, 2020, ⟨10.1371/journal.pcbi.1007732⟩
Journal articles hal-03089210v1

PPanGGOLiN: Depicting microbial diversity via a Partitioned Pangenome Graph

Guillaume Gautreau , Christophe Ambroise , Catherine Matias , Amandine Perrin , Rémi Planel , et al.
Genome Informatics 2018, Sep 2018, Hinxton, Cambridge, United Kingdom
Conference papers hal-04356757v1

PPanGGOLiN: Depicting microbial diversity via a Partitioned Pangenome Graph

Guillaume Gautreau , Christophe Ambroise , Catherine Matias , Amandine Perrin , Rémi Planel , et al.
JOBIM 2018 Journées Ouvertes Biologie, Informatique et Mathématiques, Jul 2018, Marseille, France
Conference papers hal-04355945v1
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Parallels between experimental and natural evolution of legume symbionts

Camille Clerissi , Marie Touchon , Delphine Capela , Mingxing Tang , Stéphane Cruveiller , et al.
Nature Communications, 2018, 9 (1), pp.2264. ⟨10.1038/s41467-018-04778-5⟩
Journal articles cea-01880286v1